自然语言处理领域（NLP）最近看到使用预先接受训练的语言模型来解决几乎任何任务的大量变化。尽管对各种任务的基准数据集显示了很大的改进，但这些模型通常在非标准域中对临床领域的临床域进行次优，其中观察到预训练文件和目标文件之间的巨大差距。在本文中，我们的目标是通过对语言模型的域特定培训结束这种差距，我们调查其对多种下游任务和设置的影响。我们介绍了预先训练的Clin-X（临床XLM-R）语言模型，并展示了Clin-X如何通过两种语言的十个临床概念提取任务的大幅度优于其他预先训练的变压器模型。此外，我们展示了如何通过基于随机分裂和交叉句子上下文的集合来利用我们所提出的任务和语言 - 无人机模型架构进一步改善变压器模型。我们在低资源和转移设置中的研究显​​示，尽管只有250个标记的句子，但在只有250个标记的句子时，缺乏带注释数据的稳定模型表现。我们的结果突出了专业语言模型作为非标准域中的概念提取的Clin-X的重要性，但也表明我们的任务 - 无人机模型架构跨越测试任务和语言是强大的，以便域名或任务特定的适应不需要。 Clin-Xlanguage模型和用于微调和传输模型的源代码在https://github.com/boschresearch/clin\_x/和Huggingface模型集线器上公开使用。

Deep learning models are known to put the privacy of their training data at risk, which poses challenges for their safe and ethical release to the public. Differentially private stochastic gradient descent is the de facto standard for training neural networks without leaking sensitive information about the training data. However, applying it to models for graph-structured data poses a novel challenge: unlike with i.i.d. data, sensitive information about a node in a graph cannot only leak through its gradients, but also through the gradients of all nodes within a larger neighborhood. In practice, this limits privacy-preserving deep learning on graphs to very shallow graph neural networks. We propose to solve this issue by training graph neural networks on disjoint subgraphs of a given training graph. We develop three random-walk-based methods for generating such disjoint subgraphs and perform a careful analysis of the data-generating distributions to provide strong privacy guarantees. Through extensive experiments, we show that our method greatly outperforms the state-of-the-art baseline on three large graphs, and matches or outperforms it on four smaller ones.

A universal kernel is constructed whose sections approximate any causal and time-invariant filter in the fading memory category with inputs and outputs in a finite-dimensional Euclidean space. This kernel is built using the reservoir functional associated with a state-space representation of the Volterra series expansion available for any analytic fading memory filter. It is hence called the Volterra reservoir kernel. Even though the state-space representation and the corresponding reservoir feature map are defined on an infinite-dimensional tensor algebra space, the kernel map is characterized by explicit recursions that are readily computable for specific data sets when employed in estimation problems using the representer theorem. We showcase the performance of the Volterra reservoir kernel in a popular data science application in relation to bitcoin price prediction.

Artificial intelligence(AI) systems based on deep neural networks (DNNs) and machine learning (ML) algorithms are increasingly used to solve critical problems in bioinformatics, biomedical informatics, and precision medicine. However, complex DNN or ML models that are unavoidably opaque and perceived as black-box methods, may not be able to explain why and how they make certain decisions. Such black-box models are difficult to comprehend not only for targeted users and decision-makers but also for AI developers. Besides, in sensitive areas like healthcare, explainability and accountability are not only desirable properties of AI but also legal requirements -- especially when AI may have significant impacts on human lives. Explainable artificial intelligence (XAI) is an emerging field that aims to mitigate the opaqueness of black-box models and make it possible to interpret how AI systems make their decisions with transparency. An interpretable ML model can explain how it makes predictions and which factors affect the model's outcomes. The majority of state-of-the-art interpretable ML methods have been developed in a domain-agnostic way and originate from computer vision, automated reasoning, or even statistics. Many of these methods cannot be directly applied to bioinformatics problems, without prior customization, extension, and domain adoption. In this paper, we discuss the importance of explainability with a focus on bioinformatics. We analyse and comprehensively overview of model-specific and model-agnostic interpretable ML methods and tools. Via several case studies covering bioimaging, cancer genomics, and biomedical text mining, we show how bioinformatics research could benefit from XAI methods and how they could help improve decision fairness.

Heating in private households is a major contributor to the emissions generated today. Heat pumps are a promising alternative for heat generation and are a key technology in achieving our goals of the German energy transformation and to become less dependent on fossil fuels. Today, the majority of heat pumps in the field are controlled by a simple heating curve, which is a naive mapping of the current outdoor temperature to a control action. A more advanced control approach is model predictive control (MPC) which was applied in multiple research works to heat pump control. However, MPC is heavily dependent on the building model, which has several disadvantages. Motivated by this and by recent breakthroughs in the field, this work applies deep reinforcement learning (DRL) to heat pump control in a simulated environment. Through a comparison to MPC, it could be shown that it is possible to apply DRL in a model-free manner to achieve MPC-like performance. This work extends other works which have already applied DRL to building heating operation by performing an in-depth analysis of the learned control strategies and by giving a detailed comparison of the two state-of-the-art control methods.

Human motion prediction is a complex task as it involves forecasting variables over time on a graph of connected sensors. This is especially true in the case of few-shot learning, where we strive to forecast motion sequences for previously unseen actions based on only a few examples. Despite this, almost all related approaches for few-shot motion prediction do not incorporate the underlying graph, while it is a common component in classical motion prediction. Furthermore, state-of-the-art methods for few-shot motion prediction are restricted to motion tasks with a fixed output space meaning these tasks are all limited to the same sensor graph. In this work, we propose to extend recent works on few-shot time-series forecasting with heterogeneous attributes with graph neural networks to introduce the first few-shot motion approach that explicitly incorporates the spatial graph while also generalizing across motion tasks with heterogeneous sensors. In our experiments on motion tasks with heterogeneous sensors, we demonstrate significant performance improvements with lifts from 10.4% up to 39.3% compared to best state-of-the-art models. Moreover, we show that our model can perform on par with the best approach so far when evaluating on tasks with a fixed output space while maintaining two magnitudes fewer parameters.

This project leverages advances in multi-agent reinforcement learning (MARL) to improve the efficiency and flexibility of order-picking systems for commercial warehouses. We envision a warehouse of the future in which dozens of mobile robots and human pickers work together to collect and deliver items within the warehouse. The fundamental problem we tackle, called the order-picking problem, is how these worker agents must coordinate their movement and actions in the warehouse to maximise performance (e.g. order throughput) under given resource constraints. Established industry methods using heuristic approaches require large engineering efforts to optimise for innately variable warehouse configurations. In contrast, the MARL framework can be flexibly applied to any warehouse configuration (e.g. size, layout, number/types of workers, item replenishment frequency) and the agents learn via a process of trial-and-error how to optimally cooperate with one another. This paper details the current status of the R&D effort initiated by Dematic and the University of Edinburgh towards a general-purpose and scalable MARL solution for the order-picking problem in realistic warehouses.

Telling stories is an integral part of human communication which can evoke emotions and influence the affective states of the audience. Automatically modelling emotional trajectories in stories has thus attracted considerable scholarly interest. However, as most existing works have been limited to unsupervised dictionary-based approaches, there is no labelled benchmark for this task. We address this gap by introducing continuous valence and arousal annotations for an existing dataset of children's stories annotated with discrete emotion categories. We collect additional annotations for this data and map the originally categorical labels to the valence and arousal space. Leveraging recent advances in Natural Language Processing, we propose a set of novel Transformer-based methods for predicting valence and arousal signals over the course of written stories. We explore several strategies for fine-tuning a pretrained ELECTRA model and study the benefits of considering a sentence's context when inferring its emotionality. Moreover, we experiment with additional LSTM and Transformer layers. The best configuration achieves a Concordance Correlation Coefficient (CCC) of .7338 for valence and .6302 for arousal on the test set, demonstrating the suitability of our proposed approach. Our code and additional annotations are made available at https://github.com/lc0197/emotion_modelling_stories.

Automatic video captioning aims for a holistic visual scene understanding. It requires a mechanism for capturing temporal context in video frames and the ability to comprehend the actions and associations of objects in a given timeframe. Such a system should additionally learn to abstract video sequences into sensible representations as well as to generate natural written language. While the majority of captioning models focus solely on the visual inputs, little attention has been paid to the audiovisual modality. To tackle this issue, we propose a novel two-fold approach. First, we implement a reward-guided KL Divergence to train a video captioning model which is resilient towards token permutations. Second, we utilise a Bi-Modal Hierarchical Reinforcement Learning (BMHRL) Transformer architecture to capture long-term temporal dependencies of the input data as a foundation for our hierarchical captioning module. Using our BMHRL, we show the suitability of the HRL agent in the generation of content-complete and grammatically sound sentences by achieving $4.91$, $2.23$, and $10.80$ in BLEU3, BLEU4, and METEOR scores, respectively on the ActivityNet Captions dataset. Finally, we make our BMHRL framework and trained models publicly available for users and developers at https://github.com/d-rothen/bmhrl.

Dialogue models are able to generate coherent and fluent responses, but they can still be challenging to control and may produce non-engaging, unsafe results. This unpredictability diminishes user trust and can hinder the use of the models in the real world. To address this, we introduce DialGuide, a novel framework for controlling dialogue model behavior using natural language rules, or guidelines. These guidelines provide information about the context they are applicable to and what should be included in the response, allowing the models to generate responses that are more closely aligned with the developer's expectations and intent. We evaluate DialGuide on three tasks in open-domain dialogue response generation: guideline selection, response generation, and response entailment verification. Our dataset contains 10,737 positive and 15,467 negative dialogue context-response-guideline triplets across two domains - chit-chat and safety. We provide baseline models for the tasks and benchmark their performance. We also demonstrate that DialGuide is effective in the dialogue safety domain, producing safe and engaging responses that follow developer guidelines.